Fundamentals Sessions

Tuesday | Wednesday | Thursday

Tuesday, January 29

Keynote: Open Source Bioinformatics
Ewan Birney, European Bioinformatics Institute
Track: Keynote
Time: 8:30am - 10:00am
Location: Canyon II

From SNP to Structure: A Tour Through the World of Bioinformatics
Sandra Porter, Geospiza, Inc. , Linnea Fletcher, Ph.D., Austin Community College
Track: Fundamentals
Time: 10:30am - 11:15am
Location: Canyon IV
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Keynote: Bioinformatics - Building a Nation from a Land of City States
Lincoln D. Stein, Cold Spring Harbor Laboratory
Track: Keynote
Time: 1:00pm - 1:45pm
Location: Canyon II
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Synthesizing Information About the Evolutionary Relationships of All of Life: The Tree of Life Web Project and Related Phyloinformatics Efforts
David Maddison, University of Arizona
Track: Fundamentals
Time: 2:15pm - 3:00pm
Location: Canyon IV

Tree of Life Web Project: Implementing an Open-source Database and Toolset for Sharing Phylogenetic and Other Biological Information via the Web
Travis Wheeler
Track: Fundamentals
Time: 3:00pm - 3:45pm
Location: Canyon IV
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Biopython
Andrew Dalke
Track: Fundamentals
Time: 3:00pm - 3:45pm
Location: Canyon II

Wednesday, January 30

Keynote: Integrating Gene Expression Data and Genome Sequence Data
Terry Gaasterland, The Rockefeller University
Track: Keynote
Time: 8:30am - 10:00am
Location: Canyon II

A Framework for Sharing Web-distributed Bioinformatics Services
Doug Tidwell, IBM
Track: Fundamentals
Time: 10:30am - 11:15am
Location: Canyon IV

Building Production Grade Linux Clusters for Life Science Informatics
Chris Dagdigian
Track: Fundamentals
Time: 11:15am - 12:00pm
Location: Canyon IV
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Keynote: Saccharomyces cerevisiae - Some Assembly Required
Christopher Hogue, Ph.D., Samuel Lunenfeld Research Institute
Track: Keynote
Time: 1:00pm - 1:45pm
Location: Canyon II

A Distributed Computing Environment for High Throughput Genomics
Christopher Dwan, University of Minnesota
Track: Fundamentals
Time: 2:15pm - 3:00pm
Location: Canyon IV
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High Throughput Analysis in Model Organism Genomics: The Bulk Data Pipeline To Rat Genome Database
Dean Pasko, Medical College of Wisconsin
Track: Fundamentals
Time: 3:00pm - 3:45pm
Location: Canyon IV
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ISYS: The Employment of Loose Coupling to Achieve Robust Integration Across Biological Research Areas
Damian Gessler, National Center for Genome Resources
Track: Fundamentals
Time: 4:15pm - 5:00pm
Location: Canyon IV
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There and Back Again: A Journey through the Protein Folding
Howard Feldman
Track: Fundamentals
Time: 5:00pm - 5:45pm
Location: Canyon IV

Thursday, January 31

Keynote: NCBI in the Genome Era
James Ostell, Ph.D., National Center For Biotechnology Information
Track: Keynote
Time: 8:30am - 10:00am
Location: Canyon II
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The Distributed Sequence Annotation System (DAS)
Lincoln D. Stein, Cold Spring Harbor Laboratory
Track: Fundamentals
Time: 10:30am - 11:15am
Location: Canyon IV

G2G: A Peer-to-Peer Architecture for Gene Expression Data
Jason Stewart, Open Informatics
Track: Fundamentals
Time: 11:15am - 12:00pm
Location: Canyon IV

Keynote: Integrative Systems Biology: Genomics, Proteomics, and Computation
Leroy Hood, Ph.D., The Institute for Systems Biology
Track: Keynote
Time: 1:00pm - 1:45pm
Location: Canyon II