Tutorial
Beginning Perl for Bioinformatics
James Tisdall
Track: Bioinformatics Tutorials
Date: Monday, January 28
Time: 8:30am
- 12:00pm
Location: Canyon IV
This three hour tutorial, based on the O'Reilly book of the same name, is designed to introduce biologists to bioinformatics programming by using real biological data and practically useful exercises including:
- DNA and protein sequence data
- Motif finding
- Modeling mutation
- Genbank data extraction
- PDB data extraction
- BLAST data extraction
- Regular expressions
- Controlling other bioinformatics programs
- Finding and using modules